Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLARAAARGRLDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLLPNLLERLNG
3UWK Chain:A ((23-227))
--GLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLARAAAR---DRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLLPNLLER---
General information:
TITO was launched using:
RESULT:
Template:
3UWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72450 for 1572 contacts (-46.1/contact) +
2D Compatibility (PS) -23174 + (NN) -19051 + (LL) 288
1D Compatibility (HY) -25200 + (ID) 10100
Total energy: -149687.0 ( -95.22 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3UWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWK-query.scw
PDB file :
Tito_Scwrl_3UWK.pdb
: