Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLSRHA
3LF1 Chain:A ((4-265))
---YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLSRHA
General information:
TITO was launched using:
RESULT:
Template:
3LF1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -174753 for 2245 contacts (-77.8/contact) +
2D Compatibility (PS) -29102 + (NN) -17978 + (LL) 132
1D Compatibility (HY) -34000 + (ID) 13100
Total energy: -268801.0 ( -119.73 by residue)
QMean score : 0.670
(partial model without unconserved sides chains):
PDB file :
Tito_3LF1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LF1-query.scw
PDB file :
Tito_Scwrl_3LF1.pdb
: