Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAYDIEIVNDAAHAGEANHGWCFGLPPGIRPEQWPLDPDTGYPLMHGFTLLLPEDYRVHGPEIVALSFFSLAPDQNDGGPTSVDGIREMLIDPPAQPPAEAELRPFWEAGRNSHPRLHRMEDILGGAYALIL-LDAAEFSG-APCQPRALPAGNPLLAQTEPPQWLEAGSAASFVPDWAEDDYYLLRALGGRPAAGHQQRYPLRWTARAQDPNAGVVPSEYGDGGYQLPHYWLDGKIERDNYREHPWVEGHLPNHIGGTMRPVQGVPEMSPFYVEFEEYLGGYNFGGGNAQLDFRDMRFDWACG |
| 3PFO Chain:A ((112-166)) | -----------------------------------------------------------------------------------IDVVPEGPVDLWSDPPYEAKVRDGWMIGRGA-------QDMKGGVSAMIFALDAIRTAGYAP---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9509 for 247 contacts (38.5/contact) +
2D Compatibility (PS) -5651 + (NN) -7133 + (LL) 9796
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: 3821.0 ( 15.47 by residue)
QMean score : -0.227
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