Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLSLYLLTVLIWGTTWIAIKLQMGPVAITLSIAYRFALAALVLFAVLLLGRRLQRLDARGQRLCMAQGVCLFCLNFICFYTASQWIPSGLVAVVFSTATLWNALNARLWFGQRIASNVMAGGGLGLLGLGLLFWPELVGHQATPETFYGLGLALLGTLCFSTGNMLSSLQQKAGIRPLTGNAWSM--LYGTLILLALCLFQGVPLSFDWSARYVGSLLYLAIPGSVIGFTAYLTLVGRMGPDRAAYCTVLFPVVALNISAFAEGYRWTAPALAGLVLVMLGNVLVFRKPKAPALAGPARST |
| 4GXZ Chain:A ((100-173)) | ------------------------------------------------------------------------------------------------------------------------------------------------PQQFLALHEKLMQKRVYHTDDSIKQAQQKAGATPVTLDEKSMETIRTNLQLARLVGVQGTP------ATIIGDEL---IPGAV--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GXZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28039 for 334 contacts (-83.9/contact) +
2D Compatibility (PS) -7504 + (NN) -3583 + (LL) 19632
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -24444.0 ( -73.19 by residue)
QMean score : 0.248
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