Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNGVSRLLSLALLGAALHWAPAQAEEQPRLFELLGQPGYKATWHAMFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCKPHDCGNNRLLVAFRGDKSAAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRELLMKQLESDPNWK
1UUZ Chain:A ((1-129))
------------------------EEQPRLFELLGQPGYKATWHAMFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCKPHDCGNNRLLVAFRGDKSAAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRELLMKQLESDPNWK
General information:
TITO was launched using:
RESULT:
Template:
1UUZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32536 for 951 contacts (-34.2/contact) +
2D Compatibility (PS) -14078 + (NN) -11996 + (LL) 2120
1D Compatibility (HY) -15200 + (ID) 6450
Total energy: -78140.0 ( -82.17 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_1UUZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UUZ-query.scw
PDB file :
Tito_Scwrl_1UUZ.pdb
: