Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLLVLAVQMSGCATVRTLDAAKPGAPVV--YAGTRLDWYSLHGGCCPMERFGAEAPAHPGLDLPGSALLDTLLLPFSLATAIGLNLGVSGGM
2E6K Chain:A ((595-628))
-----------------------PGLPVVAVEAGASLGWERYAHKVVALDRFGASAP------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2E6K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9215 for 129 contacts (-71.4/contact) +
2D Compatibility (PS) -3529 + (NN) -2093 + (LL) 4068
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -14319.0 ( -111.00 by residue)
QMean score : 0.100
(partial model without unconserved sides chains):
PDB file :
Tito_2E6K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E6K-query.scw
PDB file :
Tito_Scwrl_2E6K.pdb
: