Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLENRVALVTGAGQGIGRAIAECFAAEGARVLLATRTASRGQAVL-EAIRLGGGTAELLAVDLSEYDAARRAVSATLERFGQLDILLHNAAAFPQCALAELDEGTLERTLAVNLKSCFRLTQAALPALRRSVAGRVLVTSSVTGPRTAIPGLSHYAASKAGVNGFIRAAALELAGDGITVNGVEPGLVATPALGSLGDA--AALAAHIPLGRVGQPLDIAHAMLFLASDEASYITGQTLVVDGGALLPENGGLA
3RIH Chain:A ((36-287))
MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLPES----
General information:
TITO was launched using:
RESULT:
Template:
3RIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154860 for 2141 contacts (-72.3/contact) +
2D Compatibility (PS) -27422 + (NN) -10379 + (LL) -24
1D Compatibility (HY) -19200 + (ID) 5550
Total energy: -217435.0 ( -101.56 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_3RIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RIH-query.scw
PDB file :
Tito_Scwrl_3RIH.pdb
: