Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQANELLIGAGPDGQPVGQAWRLANRHGLIAGATGTGKTVTLQHLAESFSDAGVAVFAADIKGDLCGIAAPGNPQGKVAERIASMPWLNYQPKAYPTTLWDIAGKTGHPLRTTISEMGPLLLANLLELTDSQQAALFAAFQVADREGLLLLDLKDLKALLNHLKDNPEILGEDRALFTGASGQALLRRLATLEQQGAEAFFGEPALQLEDILRPEPDGRGRIHLLDASRLVHEAPKVYATFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLFNGTPKALRDRL-EQVVRLIRSKGVGVYFVTQSPGDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDTLGVLTELGIGEALVGTLEEKGTPAMVQRVAVAPPYSRIGPLSDSERAELVQRSPLKGRYDQPIDRESAYEVLANKAGAKPEVQGQATAQQESSSGVGGMAGQILGSLLSNSTVKSAMRQAANQLSRELVRGLLGSLMGGKKRR |
| 4D2I Chain:A ((349-447)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PIIAVI-EEAHVFLSKNENTLTKYWASRIAREGRKFGVGLTIVSQRPKGLDENILSQMTNKII--LKIIEPTDKKYILESSD----NLSEDLAEQLSSLDVGEAII--------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4D2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -28868 for 632 contacts (-45.7/contact) +
2D Compatibility (PS) -10553 + (NN) -5614 + (LL) 24348
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -29287.0 ( -46.34 by residue)
QMean score : 0.326
|
|
|