Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFRPRLLLTSLAIALGACSPQDPQAVTSAALAQQVILPTYSRWVEADQALASSALAYCQ----GKEDLAKARDAFHAAQKAWAELQPLLIGPLAEGNRAWQVQFWPDKKDLVGRQVEQLLKNNPQVDAAALAKASVVVQGLSAYEYILFDSKIDLADAATKARYCPLLEAIGTHQQQLAQDILARWKNDGGMLTQMSKFPNDRYADAHEAIAELLRVQVTALDMLKKK-LGTPLGRQSKGIPQPYQAEAWRS----NASLASLDASLSGAQALWEGIDGKGLKTLLPAEQKDLAGKIDAAYADSHAKLAALEQKPLSELLASEDGRNQLNALYDSLNVVHRLHEGDLARALGVQLGFNANDGD |
| 3PF0 Chain:A ((83-383)) | ------------------------------VANDMVIPAYADAAKQSDLLHDLAQKHCQKAPVSGDELQALRDQWLVLAQAWASAEMVNFGPATASMSNLYINYYPDERGLVHGGVADLITANPALTAEQLANESAVVQGIPGLEEALYAN--DSLDAGQCAYVMSASSALGTR----LKDIEKNWQQNAIKLLAI-----DKTAESDQGLNQWFNSLLSLVETMKSNAIEQPLGLSGKAKGHLPAATAGQSRAIINAKLATLNKAMT--DPVLTAILGSN-------NENTVADTLSTALADTTALLA---QMP--EDLATADKATQ-QELYDHLTNITRLIKSQLIPTLGIRVGF------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 60872 for 2236 contacts (27.2/contact) +
2D Compatibility (PS) -30476 + (NN) -13010 + (LL) 4768
1D Compatibility (HY) 13600 + (ID) 1400
Total energy: 34354.0 ( 15.36 by residue)
QMean score : 0.238
|
|
|