Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLEQILTPGRSLVNVPGGSKKRVLEQIANLVARELPEFDAQTIFENLVAREKLGSTGFGNGIAIPHCRLSGCQSPISAVLHLDAPVDFDALDGAPVDLLFVLLVPEAATEEHLELLRQIAAMLDRADVRDRLRSAPTAEALYQIVVDVQNGQ
4GQX Chain:A ((13-162))
MNRLAKILPLENVVIDLSVTSKKRVFEQ-AGLIFENQNGIARSTVTDNLFARERLGSTGLGEGVAIPHGRIKGLKHPLAAFVRLAEPIPFEAPDGQPVSLLIFLLVPEQATQAHLEILSEIAQLLSDRDTRERLHTEPDRDELHRLLTQWQ---
General information:
TITO was launched using:
RESULT:
Template:
4GQX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118170 for 1190 contacts (-99.3/contact) +
2D Compatibility (PS) -17148 + (NN) -15169 + (LL) 72
1D Compatibility (HY) -15200 + (ID) 3300
Total energy: -168915.0 ( -141.95 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_4GQX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GQX-query.scw
PDB file :
Tito_Scwrl_4GQX.pdb
: