Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPLLDYLASHPLAFVLCTILLGLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRPWENIPLVSYLALGGKCSSCKAAIGKRYPLVELATALLSGYVAWHFGFTWQAGAMLLLTWGLLAMSLIDADHQLLPDVLVLPLLWLGLIA---NHFGLFASLDDALFGAVFGYLSLWSVFWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESGTPIPFGPYLAIAGWIALLWGDQITRTYLQFAGFK |
2FWT Chain:A ((8-71)) | ----------------------------------------------------------------------------------------------------------------------------------------------LTRTECSACHMAYPAALLPARSWTALMADLPNHFGEDASLDEASRGQIESYL--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50090 for 270 contacts (-185.5/contact) +
2D Compatibility (PS) -4849 + (NN) -716 + (LL) 18080
1D Compatibility (HY) 0 + (ID) 950
Total energy: -38525.0 ( -142.69 by residue)
QMean score : 0.275
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