Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKLFQLKAHNTTVRTEILAGITTFLTMAYILFVNPSILGETGMDKGAVFVATCLAAAIGSTIMGLIANYPIALAPGMGLNAFFTYTVVLHMGHSWQVALGAVFISATMFFLLSIFRIREWIINSIPLPLRSAIAAGIGLFLALIALQNAGIVVDNPATLIGMGDLTKPAPILATLGFILIVALEARSVTGAVLIGILVVTAIAILLGVTQFGGVVSMPPSLAPTFLQLDIKGALDIGLVSVIFAFLFVDLFDNSGTLIGVAKRAGLMGKDGHMPKMGRALIADSTAAMGGSLLGTSTTTSYIESAAGVSAGGRTGLTAIVV-AILFLLALFFAPLAGSVPAFATAPALLFVAVLMASGLAEIDW--------EDITVAAPVVVTALAMPFTYSIATGIAFGFISWTAIKVLSGRWRELNPALVILSVLFVIKLGFFNA |
| 5DA0 Chain:A ((287-381)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSMINVTSGGRGRLSTFVAGAFLMVLILALQPLLVQIPMAA------LVAVMMVVAISTFDWGSLRFPKGETVVMLATVAVTV----FTHDLSLGVLIGVV----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26090 for 364 contacts (-71.7/contact) +
2D Compatibility (PS) -8802 + (NN) -4126 + (LL) 28732
1D Compatibility (HY) -10400 + (ID) 1500
Total energy: -22186.0 ( -60.95 by residue)
QMean score : 0.148
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