Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRVTLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYL-NQNDTLREEA------FLQPGTTQVAAGYAIYGPQTMLMLTLGNGVKGFTLDRELGSFVLTHDNISVPESTAEFAINMSNQRHWEAPVKRYVEELLAGKEGPLGKNYNMRWIASMVADVHRILTRGGVFMYPRDAREPEKPGKLRLMYEANPMSFIIEQAGGAATNGTQRILDIKPENLHQRVAVFLGSKQEVERITGYHAE |
1D9Q Chain:A ((19-357)) | ---ITLTSWLLQQEQKGIIDAELTIVLSSISMACKQIASLVQRANISNLT---------GEDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNLDAAVSTGSIFGIYSPNDECLP---NTLGTEEQRCIVNVCQPGSNLLAAGYCMYSSSVIFVLTIGKGVFVFTLDPLYGEFVLTQENLQIPKSGKIYSFNEGNYKLWDENLKKYIDDL--KEPGPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKS--KNGKLRLLYECAPMSFIVEQAGGKGSDGHQRVLDIQPTEIHQRVPLYIGSTEEVEKVEKYLA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181908 for 2670 contacts (-68.1/contact) +
2D Compatibility (PS) -33815 + (NN) -16930 + (LL) 712
1D Compatibility (HY) -32000 + (ID) 6950
Total energy: -270891.0 ( -101.46 by residue)
QMean score : 0.496
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