Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPPVVIYTTAWCPYCIRAKQLLQRKGVDFQEIACDGKPELRAELARKAGSTTVPQIWIGETHVGGCDDLHALERAGKLDALLSA
2KHP Chain:A ((5-86))
MVDVIIYTRPGCPYCARAKALLARKGAEFNEIDASATPELRAEMQERSGRNTFPQIFIGSVHVGGCDDLYALEDEGKLDSLL--
General information:
TITO was launched using:
RESULT:
Template:
2KHP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55300 for 583 contacts (-94.9/contact) +
2D Compatibility (PS) -9481 + (NN) -5176 + (LL) 116
1D Compatibility (HY) -8400 + (ID) 2500
Total energy: -80741.0 ( -138.49 by residue)
QMean score : 0.757
(partial model without unconserved sides chains):
PDB file :
Tito_2KHP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KHP-query.scw
PDB file :
Tito_Scwrl_2KHP.pdb
: