Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRILLLGANGQVGWELQRALAPLGELLVCDRRR----ADLADPEGLARLVRAERPQFIVNAGAYTAVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSVPFAEDAPTGPLSVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGAPTSAELIADVTAQALQRLCWDVELAARASGTYHLVASGETSWHLYARFVIEQALERGWELQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQELSEQGPL |
| 1KBZ Chain:A ((1-293)) | MN-ILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVA----GLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVP--TSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEM------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KBZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156049 for 2515 contacts (-62.0/contact) +
2D Compatibility (PS) -31612 + (NN) -14745 + (LL) 868
1D Compatibility (HY) -26800 + (ID) 7850
Total energy: -236188.0 ( -93.91 by residue)
QMean score : 0.613
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