Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLGLSRSLWGYRGFVLGSVKREFQSRYRGSLFGALWTVLNPLSMIVVYTVIFSQVMRARLPGVDDGLAYSVYLCAGLLTWGLFAEITSRSQSMFIENANLLKKISFPRICLPVIVLLNAGVNFAIILALFLGFLALSGRLPGAALLALVPLLAIQVLFAAGLGMILGVLNVFFRDVGQLFGICLQFWFWLTPIVYPIGILPEGIRSLIELNPMTALMRSYQQLFLHGQWPDWPSLLPITLLALLLCALGLRLFRQRVGEMVDEL |
3SSZ Chain:A ((23-55)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTKIKSVRTRVWNWTGPTVPPTG------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266 for 48 contacts (-5.5/contact) +
2D Compatibility (PS) -2687 + (NN) 140 + (LL) 20844
1D Compatibility (HY) 400 + (ID) 300
Total energy: 18131.0 ( 377.73 by residue)
QMean score : -0.515
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