Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEQELLAQPDAAYMDEAQQDFFRDLLLRQRQELQARIEGEFGELRDLERPSDEADLASREEQRQWQLRLLEREKKLLDKIDEALERLARGDYGWCQETGEPIGLRRLLLRPTATLCIEAKERQEKRERHVRHN
4IJJ Chain:A ((4-132))
-AEQELLAQPDAAYMDEAQQDFFRDLLLRQRQELQARIEGEFGELRDLERPSDEADLASREEQRQWQLRLLEREKKLLDKIDEALERLARGDYGWCQETGEPIGLRRLLLRPTATLCIEAKERQEKRERH----
General information:
TITO was launched using:
RESULT:
Template:
4IJJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15269 for 758 contacts (-20.1/contact) +
2D Compatibility (PS) -15227 + (NN) -17010 + (LL) 464
1D Compatibility (HY) -14000 + (ID) 6400
Total energy: -67442.0 ( -88.97 by residue)
QMean score : 0.753
(partial model without unconserved sides chains):
PDB file :
Tito_4IJJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IJJ-query.scw
PDB file :
Tito_Scwrl_4IJJ.pdb
: