Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METVVGLTAIAVALLIGLGALGTAIGFGLLGGKFLEGAARQPEMVPMLQVKMFIVAGLLDAVTMIGVGIALFFTFANPFVGQIAG
1L6T Chain:A ((8-77))
------LLYMAAAVMMGLAAIGDAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVNAIPMIAVGLGLYVMFA---------
General information:
TITO was launched using:
RESULT:
Template:
1L6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46074 for 406 contacts (-113.5/contact) +
2D Compatibility (PS) -7156 + (NN) -3899 + (LL) 804
1D Compatibility (HY) -12000 + (ID) 1950
Total energy: -70275.0 ( -173.09 by residue)
QMean score : 0.163
(partial model without unconserved sides chains):
PDB file :
Tito_1L6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6T-query.scw
PDB file :
Tito_Scwrl_1L6T.pdb
: