Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
HAAFTVAHEIGHLLGLSHDDSKFCEENFGSTEDKRLMSSILTSIDASKPWSKCTSATITEFLDDGHGNCLLDLPRKQIPGPEELPGQTYDASQQCNLTFGPEYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVEGTPCGKGRICLQGKCVDKTKKKYYSTSSHGNWGSWGSWGQCSRSCGGGVQFAYRHCNNPAPKNNGRYCTGK
3Q2H Chain:A ((140-293))
-AAFTTAHELGHVFNMPHDDAKQCASLN----DSHMMASMLSNLDHSQPWSPCSAYMITSFLDNGHGECLMDKPQNPIQLPGDLPGTSYDANRQCQFTFGEDSKHCP---TCSTLWCTG----VLVCQTKHFPWADGTSCGEGKWCINGKCVNK-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q2H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44359 for 894 contacts (-49.6/contact) +
2D Compatibility (PS) -15227 + (NN) -10852 + (LL) 552
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -85436.0 ( -95.57 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_3Q2H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q2H-query.scw
PDB file :
Tito_Scwrl_3Q2H.pdb
: