Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKDCIESTGDYFLLCDAEGPWGIILESLAILGIVVTILLLLAFLFLMRKIQ----DCSQWNVLPTQLLFLLSVLGLFGLAFAFIIEL---------------NQQTAPVRYFLFGVLFALCFSCLLAHASNLVKLVRGCVSFSWTTILCIAIGCSLLQII-----IATEYVTLIMTRGMMFV------NMTPCQLNVDFVVLLV------YVLFLMALTFFVSKATFCGPCENWKQHGRLIFITVLFSIIIWVVWISMLLRGNPQFQRQPQWDDPVVCIALVTNAWVFLLLYIVPELCILYRSCRQECPLQGNACPVTAYQHSFQVENQELSRARDSDGAEEDVALTSYGTPIQP-QTVDPTQECFIPQAKLSP--QQDAGGV--- |
| 4MFL Chain:A ((23-345)) | MDPETVRIALG---LEERTAAWLTELDELGPPAEPVRLPRGEEARDLLRRLEVPELDAEEIVAAAPDPDRDPALWWLLERTHHAIVRHMGDHRAKPRGGPPLPYEGGAAARYFHVYVFLATVPAVRRFHAERGIP-----DEVGWETLTQLGELVAIHRRKYGQGGMNMQWWTTYHLRGILYRLGRLQFSLATGKDGTPHLGLAVPEWGGPLLPKAYDESLHRARPFFDRH---FPEHG------------ARVAWGSSWML-DPQLEEYLTEDSNIIQLA---RFWTLT----------------DSAPEPGNA---------------------DGDSSILEFVFRYNGQPLDELPQRSSLERAVIAHLKAGRHWHMRTGFVKLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MFL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247680 for 2004 contacts (-123.6/contact) +
2D Compatibility (PS) -28433 + (NN) -3111 + (LL) 6280
1D Compatibility (HY) 2800 + (ID) 2450
Total energy: -272594.0 ( -136.02 by residue)
QMean score : 0.255
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