Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAANESSEGISFVLLGLTTSPGQQRPLFVLFLLLYVASLLGNGLIVAAIQASPALHAPMYFLLAHLSFADLCFASVTVPKMLANLLAHDHSISLAGCLTQMYFFF-ALGVTDSC-LLAAMAYDCYVAIRHPLPYATRMSRAMCAALVGMAWLVSHVHSLLYILLMARLSFCASHQVPHFFCDHQPLLRLSCSDTHHIQLLIFTEGAAVVVT------PFLLI----LASYGAIAAAVLQLPSASGRLR--------AVSTCGSHLAVVSLFYGTVIAVYFQATSRRE--AEWGRVATVMYTVVTPMLNPIIYSLWNRDVQGALRALLIGRRISASDS |
| 2YCX Chain:A ((17-294)) | ---------------------------LMALVVLLIVA---GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-------------HWWRDEDP-QALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCR-SPDFRKAFK------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -236324 for 1810 contacts (-130.6/contact) +
2D Compatibility (PS) -26083 + (NN) -11836 + (LL) 4284
1D Compatibility (HY) -26800 + (ID) 3600
Total energy: -300359.0 ( -165.94 by residue)
QMean score : 0.244
|
|
|