Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKEQDSNVTEFVLLGLSSSWELQLFLFLLFLFFYIAIVLGNLLIVVTVQAHAHLLQSPMYYFLGHLSFIDLCLSCVTVPKMLGDFLQQGKSISFSGCLAQIYFLHFLGASEMFLLTVMAYDRYVAICNPLRYLTVMNPQLCLWLVLACWCGGFIHSIMQVILVIQLPFCGPNELDNFYCDVPQVIKLACM--DTYVVEVLVIANSGLLSLVCFLVLLFSYAIILITLRTHFCQGQN------KVFST------CASHLTVVSLIFVPC--------VFIYLRPFCSFSVDKIFSLFYTVI----TPMLNPLIYTLRNTDMKTAMKKLRIKPCGIPLPC |
| 4UHR Chain:A ((21-302)) | --------------------------------------ILGNVLVCWAVWLNSNL-QNVTNYFVVSAAAADILVGVLAIPFAIA--ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSF---AIGLTPMLGWNNCGQPKEGKA---GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HA--PLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254429 for 1867 contacts (-136.3/contact) +
2D Compatibility (PS) -25110 + (NN) -5660 + (LL) 4672
1D Compatibility (HY) -24000 + (ID) 3200
Total energy: -307727.0 ( -164.82 by residue)
QMean score : 0.345
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