Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENNTEVTEFILVGLTDDPELQIPLFIVFLFIYLITLVGNLGMIELILLDSCLHTPMYFFLSNLSLVDFGYSSAVTP---KVMVGFLTGDKFILYNACATQFFFFVAFITAESFLLASMAYDRYAALCKPLHYTTTMTTN-------VCACL--AIG-SYICGFLNASIHTGNTFRLSFCRSNVVEHFFCDAPPLLTLSCSDNYISEMVIFFVVGFNDLFSILVILISYLFIFIT----IMKMRS-PEGRQKAFSTCASHLTA---VSIFYG-----------TGIFMYLRPNSSHFMGTDKMASVFYAIVIP----MLNPLVYSLRNKEVKSAFKKTVGKAKASIGFIF |
| 3UZA Chain:A ((12-303)) | ---------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAITISTGFCAACHGCLFIAC-----FVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP--------GCGEGQVACLFEDVVPM-------NYMVYFNFFACV----LVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSH----APLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205670 for 1719 contacts (-119.6/contact) +
2D Compatibility (PS) -25446 + (NN) -9808 + (LL) 3644
1D Compatibility (HY) -26000 + (ID) 3750
Total energy: -267030.0 ( -155.34 by residue)
QMean score : 0.297
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