Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METGNQTHAQEFLLLGFSATSEIQFILFGLFLSMYLVTF---TGNLLIILAICSDSHLHTPMYFFLSNLSFADLCFTSTTVPKMLLNILTQNKFITYAGCLSQIFFFTSFGCLDNLLLT-------VMAYDRFVAVCHPLHYTVIMNPQLCGLLVLGSWCISVMGSLLETLTVLRLSFCTEMEIPHFFCDL-LEVLKL----ACSDTFINNVVIYFATGVLG--VISFTGIFFS---YYKIVFSILRISSAGRKHKAFSTCGSHLSVVTLFYGTGFGVYLSSAATPSSRTSLVASVMYTM------VTPMLNPFIYSLRNTDMKRALGRLLSRATFFNGDITAGLS |
| 2VT4 Chain:A ((13-298)) | ----------------------------GMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-------------HWWRDEDPQALKCYQDPGCCD-FVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR-------EHKALKTLGIIMGVFTLCWLPFFLVNIVNVFN----RDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158216 for 1635 contacts (-96.8/contact) +
2D Compatibility (PS) -24139 + (NN) -583 + (LL) 5848
1D Compatibility (HY) -25200 + (ID) 3750
Total energy: -206040.0 ( -126.02 by residue)
QMean score : 0.111
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