Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKVQTTLLFLAVGEFSVGILGNAFIGLVNCMDWVKKRKIASIDLILTSLAISRICLLCVILLDCFILVLYPDVYATGKEMRIIDFFWTLTNHLSIWFATCLSIYYFFKIGNFFHPLFLWMKWRIDRVISWILLGCVVLSVFISLPATEN-LNADFRFCVKAKRKT------NLTWSCRVNKTQHASTKLFLNLATLLPFCVCLMSFFLLILSLRRHIRRMQLSAT----------------------------------------------------------------------------------------------------------------------------------------------------GCRDPSTEAHVRALKAVISFLLLFIAYYLSFLIATSSYFM-P--ETELAVIFGESIALIYPSSHSFILILGNNKLRHASLKVIWKVMSILKGRKFQQHKQI |
| 2RH1 Chain:A ((41-477)) | ------VGMGIVMSLIVLAIVFGNVLVITAIAKFER---LQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAIT---SPFK-YQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWY--R----ATHQEAINCYAEETCCDFF---TNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240150 for 2128 contacts (-112.9/contact) +
2D Compatibility (PS) -28761 + (NN) -11527 + (LL) 3752
1D Compatibility (HY) -16400 + (ID) 1650
Total energy: -294736.0 ( -138.50 by residue)
QMean score : 0.250
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