Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILLLFTQAILVSLDFF-GSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIISP-S-IFSLAKLKHPSASHILGFFLFSWVLNMFIGVIF-CCTLRLPPVKRGQSSVCHTALFLFAHELH-P-----QE----TVFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIR-GYLSAFTQPACPRVSPVKRASQAIL-LLVSFVFTYWVDFTFSFSGGVTW--INDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK |
| 1U19 Chain:A ((37-323)) | --------------------------------------PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQ---HKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNF----RF-GENHAIMGVAFTWVMALACAAPPLVG-WSRYIPE-G------------MQCSCGIDYYTPHEETNNESFVIYMFVVHFII----PLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190336 for 2155 contacts (-88.3/contact) +
2D Compatibility (PS) -26678 + (NN) 6765 + (LL) 6520
1D Compatibility (HY) -7600 + (ID) 700
Total energy: -212029.0 ( -98.39 by residue)
QMean score : 0.158
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