Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDYLRISIGSLNEKNFHVIYTNKKYHLIAEDLQN----ISTIDQTSLYV-KDIIKRVLLIGSTSIVISHNHSSGNTQPSSRIYPSLGS
2ZNR Chain:A ((32-106))
------------GIETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCS
General information:
TITO was launched using:
RESULT:
Template:
2ZNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1673 for 377 contacts (-4.4/contact) +
2D Compatibility (PS) -7555 + (NN) -977 + (LL) 1032
1D Compatibility (HY) 1200 + (ID) 250
Total energy: -8223.0 ( -21.81 by residue)
QMean score : 0.231
(partial model without unconserved sides chains):
PDB file :
Tito_2ZNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZNR-query.scw
PDB file :
Tito_Scwrl_2ZNR.pdb
: