Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIKLFFIFTLLFFDASTYCSCEDIIESIEICKEYTCQQYIGNEDFIEHKILGLSSKDLCVYIEKQDNDEMVCHHSKYGMMMEKKYLESIFKVGNQEINDFIDIANLRAKECFFISNQKTSYTNRDYIIKE------AVESNFDVLSQYND-----IKS-----IFFDKESVNKMVSEMKKFNLRSSRAAKEEILDNFNSKVVSLDSILYLSPDTWKIWVNRKLFTNTKNLKVYSVTENYVTFVWTVNQKMTKKQPNDSKNVYFGYGNIMFTLYPKQKFDLDSLSIK |
4E0V Chain:A ((178-303)) | -------------------------------------------------------------------------------------------------------VEELRRTNCSYMLNKYDTYSTKEYLLKEGNLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFAYEKRFDEIVGGMDKLPTSMYQAIQEKV--HLNARVIKIQQ------DVKEVTVTYQ----TSEKETLSVTADYVIVCTTSRAARRIKFEPPLPPKKAHALRSVHYRSGTKIFLTCTKKFW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16893 for 528 contacts (32.0/contact) +
2D Compatibility (PS) -10950 + (NN) 2618 + (LL) 9188
1D Compatibility (HY) -8800 + (ID) 1550
Total energy: 7399.0 ( 14.01 by residue)
QMean score : 0.183
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