Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEQKDKY--RPCVGIMLFNKQG--HVFIGKRFDSDSYWQMPQGGIDDGEKLEQAALRELLEEVGTDKAKIIAKNKDWIYYNLPEEV-IPTCWNGRYSGQKQR----WFLMKFYGEGKDININYTDHPEFKEWRWQSVDNLVAGAIPFKKEVYKTVIEEFSSQIKVSIIK
2O1C Chain:A ((2-122))
----KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTID---VVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQ---IVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN-------------
General information:
TITO was launched using:
RESULT:
Template:
2O1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32895 for 706 contacts (-46.6/contact) +
2D Compatibility (PS) -12613 + (NN) -9414 + (LL) 1928
1D Compatibility (HY) -9200 + (ID) 1850
Total energy: -64044.0 ( -90.71 by residue)
QMean score : 0.252
(partial model without unconserved sides chains):
PDB file :
Tito_2O1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O1C-query.scw
PDB file :
Tito_Scwrl_2O1C.pdb
: