Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSRLHCFVGYFDELLILLYLKLKWY-----YVIKYCYCC--------KFSEIDLIVSKKKELIFIEVKASLLGEDILISYLQYQSIVNSSKYFLSEKLSFLDYPIRYDLCFLSLTKRACLYKKCLA
1XMX Chain:A ((249-315))
-------ANGEWLETLVHSTVKQIQDDMPTIQDRSLNVQVYRQLGEREVRNELDVATVVNNKLHIIECKTKGMRDGDDTLYKLESLRDLLGGLQARAMLVSFRPLRHNDITRAEDLGLALIGPDELK
General information:
TITO was launched using:
RESULT:
Template:
1XMX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41720 for 288 contacts (-144.9/contact) +
2D Compatibility (PS) -6230 + (NN) -1974 + (LL) 748
1D Compatibility (HY) 2400 + (ID) 500
Total energy: -47276.0 ( -164.15 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_1XMX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XMX-query.scw
PDB file :
Tito_Scwrl_1XMX.pdb
: