Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILFSLLFSQSNTGARVILDKEIFYTELDGKMDLRFSYTFNKDSFNIKPKDKTSSYSYLRLFYLQRVYPNTQMGFNIKAE--VSNISNLKALD---IEKLNMEEWYFIIKNQGLGSIEYGKRNLVSQSMLINTSKIYVAAGGANGYWANYANLLGNEKKDDGAGYDKDEVFWVKPSIYSNYSGLKLKLKQPVVSYISPEIY----NFQLGLSYVPGKNNL-----QYNNLVASGLSYKNGLSDDISFTTTLTGEFARGDLADCTNKNPSNLQCHNQLLHWNFGLKLKFFNLDCIFSYGNSGKSGKKL------DSEVSSTYYMNAGVAYRSDS-RKLSLTYFSGGQDIIG---KGINKLTSYALSLEYPLFMGTSYYFDIVKFNTEEPKVM--NNNSGYILLAGLKLIF |
| 3NSG Chain:A ((1-341)) | ---------------MEIYNKDGNKLDLYGKAVGRHVWTTTGDS-----K---NADQTYAQIGF---KGETQINTDLTGFGQWEYRTKADRAEGEQQNSNLVRLAFAGLKYAEVGSIDYGRNYGIVYDVE-SYTDMAPYFSGE--TWG---GAY--------T----------DNY--M---TS---RAGGLLTYRNSDFFGLVDGLSFGIQYQGKNQDNHSINSQNGDGVGYTMAYEFD---G--FGVTAAYSNSKRTNDQQD-----RDGNGDRAESRAVGAKYDANNVYLAAVYAETRNMSIVENTVTDTVEMANKTQNLEVVAQYQFDFGLRPAISYVQSKGKQLNGAGGSADLAKYIQAGATYYFNKNMNVWVDYRFNLLDENDYSSSYVGTDDQAAVGITYQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12988 for 2493 contacts (5.2/contact) +
2D Compatibility (PS) -32343 + (NN) 5173 + (LL) 2756
1D Compatibility (HY) 5600 + (ID) 2050
Total energy: -7876.0 ( -3.16 by residue)
QMean score : 0.102
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