Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRILLIEDDQVSAKTVVNALTSDGHFCDVVTSAQDYNNNMVSSNGDHYDLVILDIHLPGDIDGYDILLRLRSAKIKVPVLILSCISAVNHKAKGLGYGADDYLTKPFHKSELLARIKAIVRRTKGHPESVIKIGNININFDHRVVEVKGKTVHLTNKEYSMIELLALRKGTVLTKEMFLDHLYNGLDEPSDNKIVDVFMCKLRKKLESANDGKSHIETVWGRGYVLKEYVDEEEYSSINVGENSSDYQAEQVKDNA
3W9S Chain:A ((2-117))
-KILVIEDDALLLQGLILAMQSEGYVCDGVSTAHEAALSLAS---NHYSLIVLDLGLP-DEDGLHFLSRMRREKMTQPVLILTARDTLEDRISGLDTGADDYLVKPFALEELNARIRALLR---------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3W9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102078 for 889 contacts (-114.8/contact) +
2D Compatibility (PS) -12649 + (NN) -7853 + (LL) 8240
1D Compatibility (HY) -10800 + (ID) 2550
Total energy: -127690.0 ( -143.63 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3W9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W9S-query.scw
PDB file :
Tito_Scwrl_3W9S.pdb
: