Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSLKELSLRIKNIRSVQKTTKIMQMVSAAKLLQSQKKLSNSKLYISKLHDIISSIMSSADQELLAKIFTTGDNDSYLVFIIASDRGLCGSFNSSIAKSSQEYVNKLIASSKKVDIVFLGKKAFDIGKNRFDSKSILKIENSKGITLKRVEALVDSMDLSKYDRIKVFYNKFYNTFTQKPMLETIKPWSKSSSLIDDYLTNSTIDYNYKYEPQNTEFILRSLIQNYVVTALYSALLESAASENSARMAAMESANRNTKEMLNKLALLYNCSRQAAITTDLIEVIGGAESL |
| 1EFR Chain:G ((2-272)) | --TLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVY------------------------------------------LCGAIHSSVAKQMK-----------------------------------------------------------------------------------------------------------------------------LANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1EFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2162 for 705 contacts (3.1/contact) +
2D Compatibility (PS) -13238 + (NN) -8616 + (LL) 11616
1D Compatibility (HY) -10400 + (ID) 2800
Total energy: -21276.0 ( -30.18 by residue)
QMean score : 0.407
|
|
|