Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKKNILKAIGIYSFIAMMFVIILYPLLWTFGISLNPGTNLYGAKMIPDNATFKNYAFLLFDDSSQ-----------YLTWYKNTLIVASANALFSVIFVTLTAYAFSRYRFVGRKYGLITFLILQMFPVLMAMVAIYILLNTIGL------LDSLFGLTLVYIGGSIPMNAFLVKGYFDTIPKELDESAKIDGAGHMRIFLQIMLPLAKPILAVVALFNFMGPFMDFILPKILLRSPEKFTLAVGLFNFINDKYANNFTV--FAAGAIMIAVPIAIVFLFLQRYLVSGLTTGATKG |
| 4KHZ Chain:G ((27-283)) | -----------------------IMFPLLMVVAISLRQG-NFATGSLIPEQISWDHWKLALGFSVEQADGRITPPPFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYLGG-IALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQ---NYLWGDFAAAAVMSALPITIVFLLAQR------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KHZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201884 for 1691 contacts (-119.4/contact) +
2D Compatibility (PS) -24386 + (NN) -9655 + (LL) 3320
1D Compatibility (HY) -28800 + (ID) 4700
Total energy: -266105.0 ( -157.37 by residue)
QMean score : 0.312
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