Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKVVICDD----ERIIREGLKQIIPWGDYHFNTIYTAKDGVEALSLIQQHQPELVITDIRMPRKNGVDLLNDI----ALLDCNVIILSSYDDFEYMKAGIQHHVLDYLLKPVDHAQLEVILGRLVRTLLEQQSQNGRSLASCHDAFQPLLKVEYDDYYVNQIVDQIKQSYQTKVTVSDLIQHIDVSESYAMRTFKDHVGITIVDYLNRYRILQSLQLLDRHYKHYEIADKVGFSEYKMFSYHFKKYLQMSPSDYCKQAK
1MIH Chain:A ((6-127))
-LKFLVVDDFSTMRRIVRNLLKEL------GFNNVEEAEDGVDALNKLQAGGYGFVISDWRMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKL-----------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1MIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104210 for 889 contacts (-117.2/contact) +
2D Compatibility (PS) -12473 + (NN) -9065 + (LL) 10428
1D Compatibility (HY) -11200 + (ID) 2000
Total energy: -128520.0 ( -144.57 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_1MIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MIH-query.scw
PDB file :
Tito_Scwrl_1MIH.pdb
: