Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIYETAPAKINFTLDTLFKRNDGYHEIEMIMTTVDLNDRLTFHKRKDRKI-----VVEIEHNYVPSNHKNLAYRAAQLFIE------QYQLKQGVTISIDKEIPVSAGLAGGSADAAATLRGLNRLFDIGASLEELALLGSKIGTDIPFCIYNKTALCTGRGEKIEFLNKPPSAWVILAKPNLGISSPDIFKLINLDKRYDVHTKMCYEALENRDYQQLCQSLSNRLEPISVSKHPQIDKLKNNMLKSGADGALMSGSGPTVYGLARKESQAKNIYNAVNGCCNEVYLVRLLG |
1OJ4 Chain:A ((7-257)) | -----SPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEH------EDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVD-PPEKWYLVAHPGVSIPTPVIFKDPELPRNT---PKRSIETL-------LKCEFSNDCEVIARKRFREVDAVLSWLLEYAP--SRLTGTGACVFAEFDTESEARQV------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105822 for 1967 contacts (-53.8/contact) +
2D Compatibility (PS) -25470 + (NN) -3461 + (LL) 2136
1D Compatibility (HY) -18000 + (ID) 4100
Total energy: -154717.0 ( -78.66 by residue)
QMean score : 0.444
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