Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFEAFIYNISVIVAGIYLFHRLQYSENKRMVFSKAYVTVLMTIVSLLLSVYPIPYREDYLIHLTFVPLLFLGRFTNMVYTLSATVIVAIVEIVVFNNSIMYGVTLIVIAAVTSAIGPFLKQNDVLSLLILNVVTIIILFGVALVSPIYTLSEVIILIPISLIITLASAITFVDIWHFFSLVNRYENEDKYDYLTGLGNVKEFDRHLNEISRKAEKEHQSIALLLIDIDGFKDVNDTYSHKSGDAVLKQMSQLLKNYVPNQFKIFRNGGEEFSVVI-----HNYSLDQSVKLAENIRSGVEKSSFHLPNKEVIKLSVSIGVGYLTDDDPKSQRKVFKDADDMVHVAKNQGRNKVMFNPIINL |
4RNH Chain:A ((21-186)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRF------LGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLAR-PFTLEGREFF-VTASIGVA-LSPQDGAELSLLMKNADTAMYHAKEMGKNNFQF------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85898 for 1193 contacts (-72.0/contact) +
2D Compatibility (PS) -17286 + (NN) -11006 + (LL) 19976
1D Compatibility (HY) -13200 + (ID) 2350
Total energy: -109764.0 ( -92.01 by residue)
QMean score : 0.600
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