Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVQLVLNFIIAVFWLFVTNSYTTNNFVLGFIFGLVLVYLLHRVLPGRFYVITLYRIIKLVIIFLIELIKANFDVLKIIIKPSIKNEPGFFVYHTDLKKDWQIVLLSNLITLTPGTVVLGVS---DDRTKIYIHAIDFSTKEQEVESIKTSLEKIVREVGEI |
2BGO Chain:A ((86-121)) | --------------------------------------------------------------------------------------------------------TYVQTKTLSAGNHSFGVRVGSSDWGYMNVHSLKLEL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7783 for 95 contacts (-81.9/contact) +
2D Compatibility (PS) -3519 + (NN) 936 + (LL) 12956
1D Compatibility (HY) -800 + (ID) 350
Total energy: 1440.0 ( 15.16 by residue)
QMean score : 0.099
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