Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDIINETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKDIMSV
1EK8 Chain:A ((2-185))
ISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF
General information:
TITO was launched using:
RESULT:
Template:
1EK8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43107 for 1258 contacts (-34.3/contact) +
2D Compatibility (PS) -19974 + (NN) -6068 + (LL) 0
1D Compatibility (HY) -12800 + (ID) 4200
Total energy: -86149.0 ( -68.48 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_1EK8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EK8-query.scw
PDB file :
Tito_Scwrl_1EK8.pdb
: