Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKNILKSGIALSELGLG-CMSLGTDL--KKAEQIIDCAVENGITYFDTADMYDKGINESVVGKALLKY-QQRDDIFIGTKV---GNRLTKDGSTTWDPSKSYIKEAVKGSLKRLGIDHIDLYQLHGGTIDDPLDETISAFDELKQEGIIRAYGISSIRP-NVIDYYLKHSQIETIMSQFNLIDNRPE--------------SLLDAIHNNDVKVLARGPVSKGLLTSNSVNVLDNKFKDGIFDYSH---------------DELGETIASIKEIES-------NLSALTFSYLTSHDVLGSIIVGASSVDQLKENIENYHTKVGLDQIKTARARVKDLEYTNHLV |
| 3EB4 Chain:A ((6-300)) | --RNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGL-----SRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAY-------SVARQFNLIPPRCEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACG--------IVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENI----------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -94249 for 2052 contacts (-45.9/contact) +
2D Compatibility (PS) -27254 + (NN) -13493 + (LL) 3696
1D Compatibility (HY) -20400 + (ID) 4100
Total energy: -155800.0 ( -75.93 by residue)
QMean score : 0.551
|
|
|