Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKVILVDDHYIVRQGLRFLLSTIENIEVLQDFADGETFLEYLKEHEHPDIVLLDLVMPGMNGIEITEYIKAHYPEIKVLVLTSYVDDEHVISAINKGADGYEMKDVEPQQLIETIRRVMNGEKMIHPKAQDVFETVSQKPHYTNKLSKREIEVLREMVKGKTNKEIAETLFVSEKTIKTHVSHIFSKLQVSDRTQAAIYAMENKLI
1ZN2 Chain:A ((7-187))
---VFVVDDDMSVREGLRNLLRSA-GFEV-ETFDCASTFLEHRRPEQHGCLVL-DMRMPGMSGIELQEQLTAISDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQ----LNAERRQARETQDQLEQLFSSLTGREQQVLQLTIRGLMNKQIAGELGIAEVTVKVHRHNIMQKLNV----------------
General information:
TITO was launched using:
RESULT:
Template:
1ZN2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79340 for 1304 contacts (-60.8/contact) +
2D Compatibility (PS) -18467 + (NN) 2663 + (LL) 2424
1D Compatibility (HY) -12000 + (ID) 3200
Total energy: -107920.0 ( -82.76 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1ZN2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZN2-query.scw
PDB file :
Tito_Scwrl_1ZN2.pdb
: