Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDNYTYSELLKSLQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKMKNSLDESVELFELAQNDSDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQPGAGGTESQDWASILYRMYLRWAERKSFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRI------THFPTG------------------IVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKNEEKSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAKA |
| 2JVA Chain:A ((7-91)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVHLPDAEIELTAIRAQGAGGQNVNKVSSAMHLRFDINASSLPPFYKERLLALNDSRITSDGVIVLKAQQYRTQEQNRADALLRLSELIVNAAKLEHHHHHH-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13581 for 329 contacts (-41.3/contact) +
2D Compatibility (PS) -6719 + (NN) -3614 + (LL) 20532
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -8932.0 ( -27.15 by residue)
QMean score : 0.454
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