Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENHLHADTNTDDKSTKIVRLFGLIGGALIALIIYYALDAQMPHIVEEIPKLSSLNYKAMPVVAGVAVLMGIWWMTEAIDLPATALLPLVLFNVFSVDQFSSVSASYASPIIFLFMGGFILALSMQKWNLHTRIALSIILLVGTSPRRLILGFMIATGFLSMWVSNTATAVMMFPVGMSVLQLVAKLVGKENASNAFYQKEEITKAHGGIMSNIVHKGKDIAQVIQEKTTIYRTNFSICLMLGIAYSASIGSLGTLIGTPPNALLAGYMKTAFNIEIDFAQWMVFGTPLAFIMLILAWLLLTYVIFPLKIKEIPGGKEVVKSELKKLRRLSQAEISVGVIFILASLGWIFLDTILKSWGIKIDKIDSVIAMGVSALLFILPANHQGDRLIDWGVAKKLPWDVLLLFGGGLALSAQFSKTGLSLWIGHLVSGFSHLPILFIIVMVTLMVIFLTEITSNTATAAAFLPVIGGVAMGMGYESHQSLLLTIPVALSATCAFMLPVATPPNAIAYGSGYVKITDMIKAGLWLNLVGVVLISAFSYCLVSLIFN |
| 1KIL Chain:E ((9-49)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKEEERQEALRQAEEERKAK---YAKMEAEREVMRQGIRDKYGI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KIL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4731 for 161 contacts (29.4/contact) +
2D Compatibility (PS) -4284 + (NN) -364 + (LL) 43068
1D Compatibility (HY) -400 + (ID) 550
Total energy: 42201.0 ( 262.12 by residue)
QMean score : 0.183
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