Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAQLRFTGVGGQGVLLAGEILAEAKIVS-GGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISYNQ--FKSDIKKGGIVVIDPNLVTPT------KED------EEKYQLYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEE----NIVLDTMLKKVP---AKVAETNKKAFEIGKKHALEALKK
2C42 Chain:A ((417-614))
--IQCQFWGLGADGTVGANKQAIKIIGDNTDLFAQGYFSYDSKKSGGITISHLRFGEKPIQSTY-LVNRADYVACHNPAYVGIYDILEGIKDGGTFVLNSPWSSLEDMDKHLPSGIKRTIANKKLKFYNIDAVKIATD-VGLGGRINMIMQTAFFKLAGVLPFEKAVDLLKKSIHKAYGKKGEKIVKMNTDAVDQAVTSLQEFKYP
General information:
TITO was launched using:
RESULT:
Template:
2C42.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75516 for 1354 contacts (-55.8/contact) +
2D Compatibility (PS) -18642 + (NN) -8526 + (LL) 560
1D Compatibility (HY) -4800 + (ID) 1650
Total energy: -108574.0 ( -80.19 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_2C42.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C42-query.scw
PDB file :
Tito_Scwrl_2C42.pdb
: