Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSKSLEALHHVKRYRKRELFDPLLKDYASNDYLGLSVKKDLLQNAFDKLQSFDCHSPKASMLVNGYHPLHAELEERLADLLEFESALLVGSGFLGNLALIDTLLVKNALLFMDAHYHASGIFSTKIKPNQVIFFSHNDIKDLKQKLFNAPKNKLKFIAIEGVYSMDASIAPYDFYEIIQETPNAFLIVDEAHSFGTIGENLLGFLEYHRIKEKDKIIKLSTFSKALASYGACVLAPLQVIEFLTNRAKSVIYTTAL--SLLDTALTLAHLEYFIAQKQE--LKNELSKHQQIIFETLGVRTPT-----GFFTLEFENNPALLNAQYFLKEKGFLVGAIRPPTVSKP--LLRVSLSLKNSLEDTKELANALLDYSKIQSSFKSG |
| 2JGT Chain:A ((74-398)) | -------------------------------NYMGMTFDPDVIAAGKEALEKFGSGTNGSRMLNGTFHD-HMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAG--EYVILDADSHASIY----QGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFV-VGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGL--KAMGFRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGVI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183355 for 2519 contacts (-72.8/contact) +
2D Compatibility (PS) -33757 + (NN) -14728 + (LL) 3396
1D Compatibility (HY) -22400 + (ID) 4350
Total energy: -255194.0 ( -101.31 by residue)
QMean score : 0.457
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