Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNEVQGIGIPTSHASVQTTPTKEISRTNTINTVDESKTTIDPDQYKPKLELLSERLNE------EMKRIGTDINFSYNDTIKGLVVSVKDANGDKVIREIPSKEAVELMQRMRDVIGIIFDKRG
4G63 Chain:A ((42-86))
--------------------------------------------------DLVKERLAESFHYPEEIKKF----KFNFDDAIRGLVIDSKNGNILKLSRYGAIRLSYHGTKQISFSDQKKIYRSI
General information:
TITO was launched using:
RESULT:
Template:
4G63.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3042 for 141 contacts (21.6/contact) +
2D Compatibility (PS) -4091 + (NN) -113 + (LL) 2472
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -3540.0 ( -25.11 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_4G63.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G63-query.scw
PDB file :
Tito_Scwrl_4G63.pdb
: