Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKAGFLFLAAMAIIVVSLNAKDPNVLRKIVFEKCLPNYEKNQNPSPCIEVKPDAGYVVLKDI------NGPLQYLLMPT-THISGIENPLLLDPSTPNFFYLSWQARDFMSKKYGKPIPDYAISLTINSKKGRSQNHFHIHISCISLDVRKQLDNNLKNINSRWSPLSGGLNGHKYLARRVTESELAQKSPFVMLAKEVPNAHKRMGDYGLAVVQQSDNSFVLLATQFNPLTLNRASAEEIQDHECAILR |
| 1VLR Chain:A ((208-297)) | -----------------------------------------------------SDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRD--LTPEHLPLLRNILREGQEAILKRYQ--VTGDRLRVYLHYLP--SYYHLHVHFTALGFEAPGSGVERAHLLAQVIENLECDPKHYQQRTLTFALRTDDPLLQLLQKAQQER-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VLR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54782 for 526 contacts (-104.1/contact) +
2D Compatibility (PS) -9106 + (NN) -5736 + (LL) 6844
1D Compatibility (HY) -6800 + (ID) 650
Total energy: -70230.0 ( -133.52 by residue)
QMean score : 0.338
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