Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLQQIDELENKFEEQEEQAQDTPLKQEPSTKEVKIPKKRGRKKSLLDEDKKKSFNIAFSPCVIKELNEFLLEFGSFKETRSTFIEEALIRHLKHRKNTQEQKLLKQLERLQNKEKGIMKTMNLNEFFTHKIIYKDTPLKFKDTLEQEISQASLVEKLILANILANMVFAKISNENAPKILISRLMCKFSPIDYESTIPSDFKPIDEEEYEDDLEWLNEEKEDRLFNYYLFLNGIKESDVEEVFNESVEI-YDECLIEIAQNVLKDKFSYDIDLLQVLVKGYAKEIREFLS----YKPIKEIKDFKDKDTALYISLGKDYDKEKEPFSK--KLQQCFKEILESKGI |
| 3HJE Chain:A ((271-380)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLNYSNLLFTDNEDKMTEIYKNILDIDLDELVKETKKKIIDTLFKHDIERISMMLGVNYEEIKEFLSCLKVYRTYITENDFRDEEIIRNCS-QKVYESMKKNVTAFMKLQQYMPAVFAKAYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HJE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13956 for 564 contacts (24.7/contact) +
2D Compatibility (PS) -11038 + (NN) -1605 + (LL) 17520
1D Compatibility (HY) -8000 + (ID) 1500
Total energy: 9333.0 ( 16.55 by residue)
QMean score : 0.145
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