Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNEEMQVLLLMINNKKGNLRPSHKEFLQECLIEAVLHNKNINKTTEYAIRNNIAHLPINKTEGFLVRTYNHSLGIFNENIAEKLKIPKKEKEILQPLNANEKQVLNTALENNEIDARTFKPWDLGSKEASKENASMSEELTQNNSKLSHFNENSIAQNSVGQNNVKEPNTKSNNSKQNHSLSNSDLTSNTDYNKLVADMFENQMDANGNYIGKKFSTQAYDNKTPYKVATGNASEYSSYLYSKKTKSKDIGMER |
| 2NPP Chain:B ((223-253)) | ---ELLEILGSIINGFALPLKEEHKIFLLKVLLP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5667 for 135 contacts (-42.0/contact) +
2D Compatibility (PS) -3296 + (NN) -3089 + (LL) 11204
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -4948.0 ( -36.65 by residue)
QMean score : 0.469
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