Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSLEWGLLIFLILVFLVGIGYYVFMVFSSKD----
3A0B Chain:T ((1-30))
METITYVFIFACI------IALFFFAIFFREPPRIT
General information:
TITO was launched using:
RESULT:
Template:
3A0B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11694 for 95 contacts (-123.1/contact) +
2D Compatibility (PS) -2668 + (NN) -1715 + (LL) 696
1D Compatibility (HY) -5200 + (ID) 250
Total energy: -20831.0 ( -219.27 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_3A0B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A0B-query.scw
PDB file :
Tito_Scwrl_3A0B.pdb
: